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San Juan Island

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Cheap Flights to San Juan Island

Fall in love at first flight with your vacation to San Juan Island by saving a ton of cash on your last-minute cheap flight. There’s no more scouring the internet for a good deal—book your flight to San Juan Island on Hotwire, and you’ll be up, up, and on a getaway in no time.

Because once the wheels are down in San Juan Island, the good times start rolling. So buckle up, you’re in for a fun ride.

Frequently Asked Questions About flights to San Juan Island

Don’t waste your time on endless searches for cheap airline tickets oneway or roundtrip. We’ll have you on your way to San Juan Island with a tiny bag of pretzels in your hand before you can say “tray tables in the upright position”—and for a ticket price that works for your vacay budget.

So all you have to worry about is where you’re headed after the SEA airport.

What is the cheapest month to fly to San Juan Island?

Airline ticket prices fluctuate all the time, depending on the day of the week or the month of the year. The cheapest round trip flights to San Juan Island are in , but when you book your flight on Hotwire, savings are always in season.

How many airlines fly to San Juan Island?

Variety is the spice of life, even when it comes to booking your next trip. Want options for airlines? You’ll find  to choose from for your flight to San Juan Island.

What airport is best to fly into San Juan Island?

When you’re planning your trip to San Juan Island, convenience is the name of the game. Luckily, San Juan Island Friday Harbor Airport is nearby so you can deplane and get going on checking off everything on your San Juan Island must-do list.

How much are flights to San Juan Island?

Got very cheap flights on your vacation itinerary? When you book your airline tickets to San Juan Island on Hotwire, you may just get what’s on your getaway wish list. With tickets as low as , you’ll have leftover cash for at least a magazine and a bottle of water at the airport book store.

How to get cheap flights to San Juan Island?

The trick to saving a stack of cash on your flight to San Juan Island? Snatch up that Hotwire flight deal when you see a killer rate because it could be gone in a flash. And with flights as low as  right now, why wait?

San Juan Island Flight Information
Destination airport
San Juan Island
Destination airport IATA code
SEA

Last Minute Hotel Deals in San Juan Island

Friday Harbor Suites

Friday Harbor Suites

2.5 out of 5
680 Spring Street Friday Harbor WA
Stay at this hotel in Friday Harbor. Enjoy free WiFi, free parking, and a free ferry terminal shuttle. Our guests praise the helpful staff and the clean rooms ...
8.6/10 Excellent! (1,008 reviews)
"Conveniently located, spacious rooms, good facilities make this hotel a better option to stay in Friday Harbor."

Reviewed on May 31, 2026

Friday Harbor Suites
The Orca Inn

The Orca Inn

2 out of 5
770 Mullis St Friday Harbor WA
Stay at this hotel in Friday Harbor. Enjoy free WiFi, free parking, and housekeeping. Popular attractions San Juan Islands Museum of Art and San Juan Historical ...
8/10 Very Good! (9 reviews)
"The rooms are NY style, meaning they are small. But they were perfect for just the two of us, especially because we are shorter. The location was nice and away from things. Since we mainly used it just to sleep, this perfectly met our needs. Nice staff. Rooms were clean. Showers were hot. Each room ..."

Reviewed on Jun 1, 2026

The Orca Inn
Inn to the Woods B&B

Inn to the Woods B&B

3.5 out of 5
46 Elena Drive Friday Harbor WA
Stay at this B&B in Friday Harbor. Enjoy free breakfast, free WiFi, and free parking. Popular attractions Reuben Tarte Memorial Park and Mt. Grant Preserve are ...
Inn to the Woods B&B
Earthbox Inn & Spa

Earthbox Inn & Spa

3 out of 5
410 Spring Street Friday Harbor WA
Book a stay at this spa hotel in Friday Harbor. Enjoy free WiFi, free parking, and a full-service spa. Our guests praise the helpful staff and the clean rooms ...
8.8/10 Excellent! (1,002 reviews)
"The property is well located, central and just a short walk to the ferry and downtown. The room was clean and they had daily housekeeping. Parking was easy. Coffee shop was decent. I didn’t like the room though. It’s a refurbished 1960s type building, and everything felt dated including the lighting. ..."

Reviewed on May 25, 2026

Earthbox Inn & Spa
Snug Harbor Resort

Snug Harbor Resort

2.5 out of 5
1997 Mitchell Bay Rd Friday Harbor WA
Stay at this hotel in Friday Harbor. Enjoy free WiFi, free parking, and a marina. Our guests praise the helpful staff in our reviews. Popular attractions English ...
9.8/10 Exceptional! (517 reviews)
"Serene and cozy resort."

Reviewed on May 30, 2026

Snug Harbor Resort
Bird Rock Hotel

Bird Rock Hotel

2 out of 5
35 First Street Friday Harbor WA
Stay at this hotel in Friday Harbor. Enjoy free WiFi, daily housekeeping, and a garden. Popular attractions Whale Museum and San Juan Islands Museum of Art are ...
8.8/10 Excellent! (369 reviews)
"Very nice and helpful staff! I love the location of this hotel it is so convenient."

Reviewed on May 15, 2026

Bird Rock Hotel
Discovery Inn

Discovery Inn

2 out of 5
1016 Guard St. Friday Harbor WA
Stay at this hotel in Friday Harbor. Enjoy free WiFi, free parking, and slippers. Popular attractions San Juan Historical Society and Museum and San Juan Islands ...
10/10 Exceptional! (9 reviews)
"Amazing!"

Reviewed on May 31, 2026

Discovery Inn
Friday Harbor House

Friday Harbor House

3.5 out of 5
130 West Street Friday Harbor WA
Book a stay at this business-friendly hotel in Friday Harbor. Enjoy free WiFi, free parking, and breakfast (surcharge). Our guests praise the helpful staff in ...
9.6/10 Exceptional! (271 reviews)
"Super clean room, dinner at the restaurant was peaceful and delicious with an amazing view of the harbor. Can’t wait to come back some day. Our room was pretty spectacular too with a harbor view balcony."

Reviewed on May 29, 2026

Friday Harbor House
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Hotels With Free Airport Shuttle

Earthbox Inn & Spa

Earthbox Inn & Spa

3 out of 5
410 Spring Street Friday Harbor WA
Book a stay at this spa hotel in Friday Harbor. Enjoy free WiFi, free parking, and a full-service spa. Our guests praise the helpful staff and the clean rooms ...
8.8/10 Excellent! (1,002 reviews)
"The property is well located, central and just a short walk to the ferry and downtown. The room was clean and they had daily housekeeping. Parking was easy. Coffee shop was decent. I didn’t like the room though. It’s a refurbished 1960s type building, and everything felt dated including the lighting. ..."

Reviewed on May 25, 2026

Earthbox Inn & Spa
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.