Search for Cheap Deals on
Hotels in San Rafael

Choose from 4795 San Rafael Hotel Deals

Holiday Inn Golden Gateway by IHG

Holiday Inn Golden Gateway by IHG

3.5 out of 5
1500 Van Ness Ave San Francisco CA
  • 35 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in San Francisco. Enjoy free WiFi, breakfast (surcharge), and a 24-hour fitness center. Our guests praise the pool ...
9/10 Wonderful! (5,440 reviews)
Clean room

Reviewed on Mar 23, 2026

Holiday Inn Golden Gateway by IHG
Handlery Union Square Hotel

Handlery Union Square Hotel

3.5 out of 5
351 Geary St San Francisco CA
  • 37 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in San Francisco. Enjoy free WiFi, a fitness center, and valet parking (surcharge). Our guests praise the pool and ...
8.8/10 Excellent! (2,931 reviews)
Great location, nice rooms. Yhe pool was closed when we were there due a delay in renovations, which was disappointing. But everything else was good.

Reviewed on Mar 23, 2026

Handlery Union Square Hotel
Hotel Riu Plaza Fisherman's Wharf

Hotel Riu Plaza Fisherman's Wharf

4 out of 5
2500 Mason St San Francisco CA
  • 34 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in San Francisco. Enjoy free breakfast, free WiFi, and a 24-hour fitness center. Our guests praise the breakfast ...
9/10 Wonderful! (7,380 reviews)
Great location

Reviewed on Mar 23, 2026

Hotel Riu Plaza Fisherman's Wharf
YOTEL San Francisco

YOTEL San Francisco

3 out of 5
1095 Market St San Francisco CA
  • 38 min drive from Mission San Rafael Arcangel
Stay at this hotel in San Francisco. Enjoy free breakfast, free WiFi, and a fitness center. Our guests praise the helpful staff and the clean rooms in our reviews. ...
8.2/10 Very Good! (1,013 reviews)
Great place if you want to be somewhere convenient. Stayed here for a concert at Bill Graham. Small rooms, so they’re good if you plan on justbut efficient rooms

Reviewed on Mar 23, 2026

YOTEL San Francisco
Hilton San Francisco Financial District

Hilton San Francisco Financial District

4 out of 5
750 Kearny St San Francisco CA
  • 36 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in San Francisco. Enjoy breakfast (surcharge), a fitness center, and WiFi (surcharge). Our guests praise the helpful ...
8.8/10 Excellent! (2,536 reviews)
Staff is friendly and helpful. Only thing, I wish the bedding was softer, and more high end

Reviewed on Mar 22, 2026

Hilton San Francisco Financial District
Hotel Julian

Hotel Julian

3 out of 5
940 Sutter Street San Francisco CA
  • 36 min drive from Mission San Rafael Arcangel
Stay at this hotel in San Francisco. Enjoy free WiFi, a fitness center, and a 24-hour front desk. Popular attractions Pier 39 and Oracle Park are located ...
8.6/10 Excellent! (678 reviews)
The hotel is aging and not spotless, but the front desk people were friendly and the bedding was fresh.

Reviewed on Mar 22, 2026

Hotel Julian
Hilton San Francisco Union Square

Hilton San Francisco Union Square

4 out of 5
333 O'Farrell St. San Francisco CA
  • 37 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in San Francisco. Enjoy 2 bars/lounges, breakfast (surcharge), and a 24-hour health club. Our guests praise the helpful ...
8.4/10 Very Good! (1,225 reviews)
Everything is good, except there is no restaurant in the hotel.

Reviewed on Mar 23, 2026

Hilton San Francisco Union Square
DoubleTree by Hilton Hotel Berkeley Marina

DoubleTree by Hilton Hotel Berkeley Marina

4 out of 5
200 Marina Blvd Berkeley CA
  • 39 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in Berkeley. Enjoy free WiFi, a marina, and breakfast (surcharge). Our guests praise the breakfast and the restaurant ...
8.2/10 Very Good! (4,410 reviews)
It's very dated but OK fine the price

Reviewed on Mar 23, 2026

DoubleTree by Hilton Hotel Berkeley Marina
The Marker Union Square San Francisco

The Marker Union Square San Francisco

4 out of 5
501 Geary St San Francisco CA
  • 37 min drive from Mission San Rafael Arcangel
Book a stay at this boutique hotel in San Francisco. Enjoy breakfast (surcharge), room service, and a 24-hour fitness center. Our guests praise the restaurant ...
9.2/10 Wonderful! (1,199 reviews)
Great property staff very professional and courteous. Beautiful property and amenities!!! Definitely a special place to spend for vacation and business meetings in the city.

Reviewed on Mar 23, 2026

The Marker Union Square San Francisco
Club Quarters Hotel in San Francisco

Club Quarters Hotel in San Francisco

4 out of 5
424 Clay St San Francisco CA
  • 37 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in San Francisco. Enjoy free WiFi, breakfast (surcharge), and room service. Our guests praise the helpful staff and ...
9/10 Wonderful! (3,014 reviews)
-

Reviewed on Mar 23, 2026

Club Quarters Hotel in San Francisco
Hotel Zephyr San Francisco

Hotel Zephyr San Francisco

4 out of 5
250 Beach Street San Francisco CA
  • 34 min drive from Mission San Rafael Arcangel
Book a stay at this boutique hotel in San Francisco. Enjoy free WiFi, a 24-hour fitness center, and parking (surcharge). Our guests praise the helpful staff ...
8.6/10 Excellent! (2,485 reviews)
Front desk was wonderful and made my 7-year old feel extra special for her birthday! The rooms were great. All staff encounter on property was friendly and helpful

Reviewed on Mar 23, 2026

Hotel Zephyr San Francisco
The Pickwick Hotel

The Pickwick Hotel

3.5 out of 5
85 5th St San Francisco CA
  • 38 min drive from Mission San Rafael Arcangel
Book a stay at this business-friendly hotel in San Francisco. Enjoy free WiFi, a fitness center, and parking (surcharge). Our guests praise the helpful staff ...
7.8/10 Good! (1,165 reviews)
Room was exactly what we needed -- spacious with functioning A/C, wifi, and a clean bathroom. Building is certainly older and may not be as "chic" as some newer hotels but we loved its charm and ease. Location was great, seating areas around the hotel were great, staff were friendly and helpful

Reviewed on Mar 23, 2026

The Pickwick Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Find cheap hotels in San Rafael

You’re not an average traveler—and Hotwire knows it. Your wanderlust takes you off the beaten path to discover unique adventures and every travel destination’s lesser-known tourist scenes. Hotwire has the hookup! Book your San Rafael hotel with Hotwire to complete your one-of-a-kind travel checklist.

For you, intrepid voyager, Hotwire has a large selection of the best hotels in San Rafael.

Choosing the right hotel in California has everything to do with the way you want your trip to go. If you’ve scribbled a few obscure destinations on your itinerary, you probably already have a good sense of how your getaway is taking shape. Lean into that by booking one of San Rafael’s 4,795 hotels. Choose the one that best catches your trip’s tourist drift.

If you’re traveling during the week for business, Hotwire can score you a luxury hotel for as low as $125. In town for pleasure? Hotwire still has you covered. If you’re in the mood for a quick last-minute weekend getaway or spa retreat, you can get great San Rafael hotel deals at the last minute.

While traveling, where you stay plays a major role in your overall vacation enjoyment. Choosing the right hotel is just as important as making sure you book the right flight and car rental. If you’re traveling with family or friends, you may need to book a hotel with connecting rooms. If you enjoy an elegant and relaxing hotel ambiance, opt for one of Hotwire’s luxury hotels in San Rafael. No matter your reason for visiting San Rafael, with Hotwire’s large selection of hotels in the area, you’re sure to book a hotel that meets all your accommodation needs.

Frequently Asked Questions About San Rafael hotels

Where can I find the best last-minute travel deals?

If you’re traveling in the spirit of spontaneity, you’ll love the idea of leaving your exact hotel choice up to chance. With Hotwire Hot Rates, you can unlock great deals on your next flight, hotel, or car rental. Just plug in your general preferences and let Hotwire choose last-minute hotel deals in San Rafael for as low as $125.

How many hotels are there in San Rafael?

With over 4,795 hotels in San Rafael, you’re sure to find one that best matches your travel mood. When you book with Hotwire, you can score a stellar home away from home for as low as $125.

How to find cheap car rentals in San Rafael?

Finding a cheap car rental deal in San Rafael is as easy as scoring cheap hotels in San Rafael. Hotwire partners with top-of-the-line car rental companies to bring you a large selection of affordable options. Whether you’re in need of a large SUV for the entire family or a more compact but stylish vehicle, Hotwire has you covered. You can unlock great car rental deals if you book a Hotwire Hot Rate at the last minute.