Search for Cheap Deals on
Hotels in Stony Brook

Check Last Minute Stony Brook Hotel Deals

Tonight Apr 3 - Apr 4This weekend Apr 3 - Apr 5

Choose from 1248 Stony Brook Hotel Deals

Hilton Garden Inn Stony Brook

Hilton Garden Inn Stony Brook

3 out of 5
1 Circle Road Stony Brook NY
  • 8 min walk from Stony Brook University
Book a stay at this business-friendly hotel in Stony Brook. Enjoy free parking, breakfast (surcharge), and a free area shuttle. Our guests praise the helpful ...
9/10 Wonderful! (1,001 reviews)
great

Reviewed on Apr 1, 2026

Hilton Garden Inn Stony Brook
Hyatt Regency Long Island

Hyatt Regency Long Island

4 out of 5
1717 Motor Parkway Hauppauge NY
  • 18 min drive from Stony Brook University
Book a stay at this golf hotel in Hauppauge. Enjoy free WiFi, free parking, and an outdoor pool. Our guests praise the helpful staff and the clean rooms in our ...
8.2/10 Very Good! (1,162 reviews)
Great

Reviewed on Apr 2, 2026

Hyatt Regency Long Island
Hilton Long Island/Huntington

Hilton Long Island/Huntington

3.5 out of 5
598 Broad Hollow Rd Melville NY
  • 56 min drive from Stony Brook University
Stay at this hotel in Melville. Enjoy free parking, 2 restaurants, and breakfast (surcharge). Our guests praise the helpful staff in our reviews. Popular attractions ...
7.4/10 Good! (1,001 reviews)
Just really slept in the hotel. I don’t like the bathroom personal products as the smell isn’t good for me. Thank goodness I packed my own personal products. The temperature was also warm in the room but my window did open which really helped out! Bed was comfy and the tv worked.

Reviewed on Mar 26, 2026

Hilton Long Island/Huntington
Motel 6 Milford, CT

Motel 6 Milford, CT

2 out of 5
111 Schoolhouse Road Milford CT
  • 51 min drive from Stony Brook University
Book a stay at this business-friendly motel in Milford. Enjoy free WiFi, free parking, and a 24-hour front desk. Popular attractions Silver Sands State Park ...
6.2/10 (1,003 reviews)
Everything went as smooth as possible with my stay. My reservation was ready for me when I walked in the door. Parking was well lit and plenty of it complementary coffee in the morning.

Reviewed on Apr 2, 2026

Motel 6 Milford, CT
 Holiday Inn Express Hauppauge-Long Island

Holiday Inn Express Hauppauge-Long Island

2.5 out of 5
2050 Express Dr S Hauppauge NY
  • 24 min drive from Stony Brook University
Book a stay at this business-friendly hotel in Hauppauge. Enjoy free breakfast, free WiFi, and a 24-hour fitness center. Our guests praise the helpful staff ...
8.2/10 Very Good! (1,397 reviews)
Everything was perfect would definitely recommend

Reviewed on Apr 3, 2026

Holiday Inn Express Hauppauge-Long Island
Norwalk Inn & Conference Center

Norwalk Inn & Conference Center

4 out of 5
99 East Avenue Norwalk CT
  • 58 min drive from Stony Brook University
Book a stay at this business-friendly hotel in Norwalk. Enjoy free WiFi, free parking, and 2 restaurants. Our guests praise the restaurant and the helpful staff ...
8.8/10 Excellent! (1,456 reviews)
I love the hard wood floor room

Reviewed on Apr 1, 2026

Norwalk Inn & Conference Center
Radisson Hotel Hauppauge-Long Island

Radisson Hotel Hauppauge-Long Island

3.5 out of 5
110 Vanderbilt Motor Pkwy Hauppauge NY
  • 30 min drive from Stony Brook University
Book a stay at this business-friendly hotel in Hauppauge. Enjoy free WiFi, free parking, and breakfast (surcharge). Our guests praise the clean rooms in our ...
6.4/10 (1,464 reviews)
My girlfriend car got broken into and the staff was no help retrieving the footage so we can give it to the police will Never come here again a bad establishment booked a king size gave me a double bed they should be shut down and roaches are in the room

Reviewed on Apr 1, 2026

Radisson Hotel Hauppauge-Long Island
Hampton Inn Long Island-Brookhaven

Hampton Inn Long Island-Brookhaven

2.5 out of 5
2000 North Ocean Ave. Farmingville NY
  • 22 min drive from Stony Brook University
Book a stay at this business-friendly hotel in Farmingville. Enjoy free breakfast, free WiFi, and a fitness center. Our guests praise the breakfast and the helpful ...
8.8/10 Excellent! (1,358 reviews)
Pros - Clean room, breakfast was excellent, rooms were a good size, front desk and breakfast staff was really welcoming and friendly. Very good stay. And would stay again. Cons - Parking lot was eh. Lots of people smoking in cars in the lot all hours. Seemed that some people were living there on ...

Reviewed on Apr 2, 2026

Hampton Inn Long Island-Brookhaven
Marriott Melville Long Island

Marriott Melville Long Island

3.5 out of 5
1350 Walt Whitman Rd Melville NY
  • 54 min drive from Stony Brook University
Book a stay at this business-friendly hotel in Melville. Enjoy free parking, breakfast (surcharge), and a free area shuttle. Our guests praise the helpful staff ...
8.6/10 Excellent! (1,002 reviews)
N/A

Reviewed on Mar 31, 2026

Marriott Melville Long Island
Red Roof Inn Milford - New Haven

Red Roof Inn Milford - New Haven

2 out of 5
10 Rowe Ave Milford CT
  • 51 min drive from Stony Brook University
Stay at this hotel in Milford. Enjoy free WiFi, free parking, and a 24-hour front desk. Our guests praise the clean rooms in our reviews. Popular attractions ...
7/10 Good! (1,003 reviews)
Good location, staffs are friendly and helpful, clean room. Good overall 👍

Reviewed on Apr 2, 2026

Red Roof Inn Milford - New Haven
SureStay Plus by Best Western Woodbury Inn

SureStay Plus by Best Western Woodbury Inn

2.5 out of 5
7940 Jericho Tpke Woodbury NY
  • 1 hour drive from Stony Brook University
Book a stay at this golf hotel in Woodbury. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the breakfast and the helpful staff in our reviews. ...
7.4/10 Good! (1,002 reviews)
I had previously stayed at this hotel & everying was good. Upon arrival at this stay their computer system was down, this was the first day for desk manager. She could not reach supervisor or housekeeping staff to verify if room was availabe. I was forced to find another hotel at the last minute. ...

Reviewed on Mar 30, 2026

SureStay Plus by Best Western Woodbury Inn
Holiday Inn Plainview-Long Island by IHG

Holiday Inn Plainview-Long Island by IHG

3 out of 5
215 Sunnyside Blvd Plainview NY
  • 1 hour drive from Stony Brook University
Stay at this hotel in Plainview. Enjoy free WiFi, free parking, and breakfast (surcharge). Our guests praise the helpful staff and the clean rooms in our reviews. ...
8/10 Very Good! (1,000 reviews)
Clean and comfortable

Reviewed on Mar 28, 2026

Holiday Inn Plainview-Long Island by IHG
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Find cheap hotels in Stony Brook

You’re not an average traveler—and Hotwire knows it. Your wanderlust takes you off the beaten path to discover unique adventures and every travel destination’s lesser-known tourist scenes. Hotwire has the hookup! Book your Stony Brook hotel with Hotwire to complete your one-of-a-kind travel checklist.

For you, intrepid voyager, Hotwire has a large selection of the best hotels in Stony Brook.

Choosing the right hotel in New York has everything to do with the way you want your trip to go. If you’ve scribbled a few obscure destinations on your itinerary, you probably already have a good sense of how your getaway is taking shape. Lean into that by booking one of Stony Brook’s 1,248 hotels. Choose the one that best catches your trip’s tourist drift.

If you’re traveling during the week for business, Hotwire can score you a luxury hotel for as low as $75. In town for pleasure? Hotwire still has you covered. If you’re in the mood for a quick last-minute weekend getaway or spa retreat, you can get great Stony Brook hotel deals at the last minute.

While traveling, where you stay plays a major role in your overall vacation enjoyment. Choosing the right hotel is just as important as making sure you book the right flight and car rental. If you’re traveling with family or friends, you may need to book a hotel with connecting rooms. If you enjoy an elegant and relaxing hotel ambiance, opt for one of Hotwire’s luxury hotels in Stony Brook. No matter your reason for visiting Stony Brook, with Hotwire’s large selection of hotels in the area, you’re sure to book a hotel that meets all your accommodation needs.

Frequently Asked Questions About Stony Brook hotels

Where can I find the best last-minute travel deals?

If you’re traveling in the spirit of spontaneity, you’ll love the idea of leaving your exact hotel choice up to chance. With Hotwire Hot Rates, you can unlock great deals on your next flight, hotel, or car rental. Just plug in your general preferences and let Hotwire choose last-minute hotel deals in Stony Brook for as low as $75.

How many hotels are there in Stony Brook?

With over 1,248 hotels in Stony Brook, you’re sure to find one that best matches your travel mood. When you book with Hotwire, you can score a stellar home away from home for as low as $75.

How to find cheap car rentals in Stony Brook?

Finding a cheap car rental deal in Stony Brook is as easy as scoring cheap hotels in Stony Brook. Hotwire partners with top-of-the-line car rental companies to bring you a large selection of affordable options. Whether you’re in need of a large SUV for the entire family or a more compact but stylish vehicle, Hotwire has you covered. You can unlock great car rental deals if you book a Hotwire Hot Rate at the last minute.